Scientist - Computational Biophysics

A 501(c)(3) science-and-technology research institute/foundation operating direct Neuro-AI research, life-sciences programs through Radial, and an open-science residency program.

Emeryville, CA, United States
About Astera Institute

Astera Institute supports and operates open public-goods work for science and technology. Its current activities include neuroscience-informed AGI research, AI-enabled life-sciences programs, open datasets and publishing infrastructure, and residencies for early-stage projects.

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Skills

Candidate Availability

Required and preferred rules are kept separate and reflect the wording in the original posting.

About the Role

You will build protein representations that combine language-model embeddings with structural data for functional prediction. You will develop large-scale bioinformatics pipelines, fine-tune machine-learning models, integrate biological data sources, validate models with experimental partners, and help establish standards and tools for dynamic structural biology.

Requirements

  • PhD in bioinformatics, computational biology, machine learning, or a related field
  • Understanding of protein structure and function
  • Experience building large bioinformatics pipelines and managing high-dimensional datasets
  • Proficiency fine-tuning or modifying machine-learning models
  • Familiarity with protein language models such as ESM and AlphaFold is preferred
  • Ability to drive research questions from conception through execution

Responsibilities

  • Build ensemble-aware protein representations for functional prediction
  • Develop and maintain large-scale bioinformatics pipelines
  • Fine-tune or architect machine-learning models for sequence-structure-function relationships
  • Integrate evolutionary, binding-affinity, allostery, and functional-annotation data
  • Collaborate with experimental partners to refine models against experimental measurements
  • Contribute standards and tools for dynamic structural biology